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Mr Joshua Lambert

Research Software Engineer

United Kingdom

Jump to: Affiliations Teaching Research Publications
I am a Research Software Engineer working in the Epiverse-TRACE initiative (within CMMID). My work primarily involves developing R packages to enable epidemiologists to conduct reliable and robust analysis on disease outbreak data.

My background is in evolutionary biology and from 2019-2023 I did my PhD at the University of Groningen.

Affiliations
Department of Infectious Disease Epidemiology and Dynamics
Faculty of Epidemiology and Population Health

Teaching
As a Research Software Engineer I do not have a teaching component in my role at LSHTM. However, I have taught on a variety of topics to date, from evolutionary biology and ecology, to mathematical modelling, to software development including developing R packages.

Research
My interests are in developing intuitive software for the study of infectious disease dynamics.

Selected Publications
DAISIEmainland
LAMBERT, JW; Bilderbeek, R; Santos Neves, P;
2024
Zenodo
cleanepi: Clean and Standardize Epidemiological Data
Mané, K; Jombart, T; Bah, B; Ahadzie, B; Mohammed, N; Degoot, AM; Gruson, H; Gupte, PR; AZAM, JM; LAMBERT, JW; Hartgerink, C;
2024
Comprehensive R Archive Network
cfr: Estimate Disease Severity and Case Ascertainment
Gupte, PR; KUCHARSKI, AJ; RUSSELL, TW; LAMBERT, JW; Gruson, H; Taylor, T; AZAM, JM; Degoot, AM; FUNK, S;
2024
Comprehensive R Archive Network
numberize: Convert Words to Numbers in Multiple Languages
Hartgerink, C; LAMBERT, JW; Mané, K; Gruson, H; Ahadzie, B;
2024
Comprehensive R Archive Network
finalsize: Calculate the Final Size of an Epidemic
Gupte, P; VAN LEEUWEN, E; KUCHARSKI, A; EGGO, RM; Gruson, H; Jombart, T; VALLE CAMPOS, A; LAMBERT, JW;
2024
Comprehensive R Archive Network
epiverse-trace/simulist
LAMBERT, J; Gruson, H; KUCHARSKI, AJ; Tamayo Cuartero, C;
2024
Github
DAISIE: Dynamical Assembly of Islands by Speciation, Immigration and Extinction
Etienne, RS; Valente, L; Phillimore, AB; Haegeman, B; LAMBERT, JW; Santos Neves, P; Xie, S; Bilderbeek, RJ C; Hildenbrandt, H; Hauffe, T; Laudanno, G; Kristensen, N; Scherrer, R;
2023
Comprehensive R Archive Network
epiverse-trace/epiparameter
LAMBERT, J; Gruson, H; KUCHARSKI, AJ; Gupte, P; Salmon, M; Campos, AV; Monticone, P;
2023
Github
DAISIEmainland: an R package for simulating an island-mainland system for macroevolution on islands
LAMBERT, J; Santos Neves, P; Etienne, R; Valente, L; Bilderbeek, R;
2023
California Digital Library (CDL)
epiverse-trace
Pavlich-Mariscal, J; EGGO, RM; KUCHARSKI, AJ; Gruson, H; RUSSELL, TW; Valle Campos, A; Cucunubá, ZM; Santos-Vega, M; Gupte, P; Azam, J; Torres Domínguez, N; LAMBERT, J; Gomez, G; Umaña, JD; Quevedo-Vega, DS; Gámez López, ME; Carnegie, A;
2023
London School of Hygiene & Tropical Medicine
See more information
Joshua Lambert

Contact

United Kingdom