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Mr Jody Phelan

Assistant Professor

United Kingdom

Jump to: Affiliations Teaching Publications

Affiliations
Department of Infection Biology
Faculty of Infectious and Tropical Diseases

Centres

Antimicrobial Resistance Centre

Teaching
Help organise and teach on the Infectious Disease 'Omics short course at LSHTM and overseas. Teach on the pathogen genomics masters module.

Selected Publications
Mycobacterium tuberculosis whole genome sequencing provides insights into the Manila strain and drug-resistance mutations in the Philippines.
PHELAN, JE; Lim, DR; Mitarai, S; De Sessions, PF; Tujan, MA A; Reyes, LT; Medado, IA P; Palparan, AG; Naim, AN M; Jie, S; Segubre-Mercado, E; Simoes, B; CAMPINO, S; HAFALLA, JC; Murase, Y; Morishige, Y; HIBBERD, ML; Kato, S; Ama, MC G; CLARK, TG;
2019
Scientific reports
Integrating informatics tools and portable sequencing technology for rapid detection of resistance to anti-tuberculous drugs.
PHELAN, JE; O'Sullivan, DM; Machado, D; Ramos, J; OPPONG, YE A; CAMPINO, S; O'Grady, J; McNerney, R; HIBBERD, ML; Viveiros, M; Huggett, JF; CLARK, TG;
2019
Genome medicine
Genome-wide analysis of multi- and extensively drug-resistant Mycobacterium tuberculosis.
COLL, F; PHELAN, J; Hill-Cawthorne, GA; Nair, MB; Mallard, K; Ali, S; Abdallah, AM; Alghamdi, S; Alsomali, M; Ahmed, AO; Portelli, S; OPPONG, Y; Alves, A; Bessa, TB; CAMPINO, S; Caws, M; Chatterjee, A; CRAMPIN, AC; DHEDA, K; FURNHAM, N; GLYNN, JR; Grandjean, L; Minh Ha, D; Hasan, R; Hasan, Z; ... CLARK, TG.
2018
Nature genetics
The variability and reproducibility of whole genome sequencing technology for detecting resistance to anti-tuberculous drugs.
PHELAN, J; O'Sullivan, DM; Machado, D; Ramos, J; Whale, AS; O'Grady, J; DHEDA, K; CAMPINO, S; McNerney, R; Viveiros, M; Huggett, JF; CLARK, TG;
2016
Genome medicine
Mycobacterium tuberculosis whole genome sequencing and protein structure modelling provides insights into anti-tuberculosis drug resistance.
PHELAN, J; COLL, F; McNerney, R; Ascher, DB; Pires, DE V; FURNHAM, N; Coeck, N; Hill-Cawthorne, GA; Nair, MB; Mallard, K; Ramsay, A; CAMPINO, S; HIBBERD, ML; Pain, A; Rigouts, L; CLARK, TG;
2016
BMC medicine
An open-access dashboard to interrogate the genetic diversity of Mycobacterium tuberculosis clinical isolates.
PHELAN, J; Van den Heede, K; Masyn, S; Verbeeck, R; Lamprecht, DA; KOUL, A; WALL, RJ;
2024
Scientific reports
Whole genome sequence analysis of population structure and insecticide resistance markers in Anopheles melas from the Bijagós Archipelago, Guinea-Bissau.
MOSS, S; Pretorius, E; Ceesay, S; Da Silva, ET; HUTCHINS, H; NDIATH, MO; Acford-palmer, H; COLLINS, EL; Higgins, M; PHELAN, J; JONES, RT; VASILEVA, H; Rodrigues, A; Krishna, S; CLARK, TG; LAST, A; CAMPINO, S;
2024
Parasites & vectors
Whole genome analysis of Plasmodium malariae identifies reduced susceptibility to pyrimethamine, validated using ortholog replacement in P. knowlesi
IBRAHIM, A; Mohring, F; Manko, E; Schalkwyk, DV; PHELAN, J; Nolder, D; Borrmann, S; Adegnika, A; Santi, SD; Alam, MS; Mondal, D; Nosten, F; SUTHERLAND, C; MOON, R; CLARK, T; CAMPINO, S;
2024
Research Square
Comparisons of genome assembly tools for characterization of <i>Mycobacterium tuberculosis</i> genomes using hybrid sequencing technologies.
Trisakul, K; Hinwan, Y; Eisiri, J; Salao, K; Chaiprasert, A; Kamolwat, P; Tongsima, S; CAMPINO, S; PHELAN, J; CLARK, TG; Faksri, K;
2024
PeerJ
ResMAP-a saturation mutagenesis platform enabling parallel profiling of target-specific resistance-conferring mutations in &lt;i&gt;Plasmodium&lt;/i&gt;.
WALL, RJ; MacGowan, SA; Hallyburton, I; Syed, AJ; Ajay Castro, S; Dey, G; Milne, R; Patterson, S; PHELAN, J; Wiedemar, N; Wyllie, S;
2024
mBio
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Jody Phelan

Contact

United Kingdom