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Mr Jody Phelan

Assistant Professor

United Kingdom

Jump to: Affiliations Teaching Publications

Affiliations
Department of Infection Biology
Faculty of Infectious and Tropical Diseases

Centres

Antimicrobial Resistance Centre

Teaching
Help organise and teach on the Infectious Disease 'Omics short course at LSHTM and overseas. Teach on the pathogen genomics masters module.

Selected Publications
Mycobacterium tuberculosis whole genome sequencing provides insights into the Manila strain and drug-resistance mutations in the Philippines.
PHELAN, JE; Lim, DR; Mitarai, S; De Sessions, PF; Tujan, MA A; Reyes, LT; Medado, IA P; Palparan, AG; Naim, AN M; Jie, S; Segubre-Mercado, E; Simoes, B; CAMPINO, S; HAFALLA, JC; Murase, Y; Morishige, Y; HIBBERD, ML; Kato, S; Ama, MC G; CLARK, TG;
2019
Scientific reports
Integrating informatics tools and portable sequencing technology for rapid detection of resistance to anti-tuberculous drugs.
PHELAN, JE; O'Sullivan, DM; Machado, D; Ramos, J; OPPONG, YE A; CAMPINO, S; O'Grady, J; McNerney, R; HIBBERD, ML; Viveiros, M; Huggett, JF; CLARK, TG;
2019
Genome medicine
Genome-wide analysis of multi- and extensively drug-resistant Mycobacterium tuberculosis.
COLL, F; PHELAN, J; Hill-Cawthorne, GA; Nair, MB; Mallard, K; Ali, S; Abdallah, AM; Alghamdi, S; Alsomali, M; Ahmed, AO; Portelli, S; OPPONG, Y; Alves, A; Bessa, TB; CAMPINO, S; Caws, M; Chatterjee, A; CRAMPIN, AC; DHEDA, K; FURNHAM, N; GLYNN, JR; Grandjean, L; Minh Ha, D; Hasan, R; Hasan, Z; ... CLARK, TG.
2018
Nature genetics
The variability and reproducibility of whole genome sequencing technology for detecting resistance to anti-tuberculous drugs.
PHELAN, J; O'Sullivan, DM; Machado, D; Ramos, J; Whale, AS; O'Grady, J; DHEDA, K; CAMPINO, S; McNerney, R; Viveiros, M; Huggett, JF; CLARK, TG;
2016
Genome medicine
Mycobacterium tuberculosis whole genome sequencing and protein structure modelling provides insights into anti-tuberculosis drug resistance.
PHELAN, J; COLL, F; McNerney, R; Ascher, DB; Pires, DE V; FURNHAM, N; Coeck, N; Hill-Cawthorne, GA; Nair, MB; Mallard, K; Ramsay, A; CAMPINO, S; HIBBERD, ML; Pain, A; Rigouts, L; CLARK, TG;
2016
BMC medicine
Careful classification of potential bedaquiline resistance mutations is critical when analysing their clinical impact.
PHELAN, JE; Utpatel, C; Ismail, N; Cortes, T; Niemann, S; Cirillo, DM; Schön, T; Miotto, P; Köser, CU;
2024
The international journal of tuberculosis and lung disease : the official journal of the International Union against Tuberculosis and Lung Disease
Large-scale statistical analysis of Mycobacterium tuberculosis genome sequences identifies compensatory mutations associated with multi-drug resistance.
Billows, N; PHELAN, J; Xia, D; Peng, Y; CLARK, TG; Chang, Y-M;
2024
Scientific reports
Acute and long-term outcomes of SARS-CoV-2 infection in school-aged children in England: Study protocol for the joint analysis of the COVID-19 schools infection survey (SIS) and the COVID-19 mapping and mitigation in schools (CoMMinS) study.
Looker, KJ; McClenaghan, E; Judd, A; Pierotti, L; Downing, H; PHELAN, J; WARREN-GASH, C; Ngozi, K; Dawe, F; RELTON, C; Christensen, H; Hay, AD; MANGTANI, P; NGUIPDOP-DJOMO, P; Denholm, R;
2024
PloS one
Recruitment of multi-segment genomic RNAs by Bluetongue virus requires a preformed RNA network.
Sung, P-Y; PHELAN, JE; LUO, D; Kulasegaran-Shylini, R; Bohn, P; Smyth, RP; ROY, P;
2024
Nucleic acids research
Genome-wide association study of global Plasmodium vivax populations provides insights into the evolution of drug resistance
Ngwana-Joseph, G; PHELAN, J; Manko, E; Dombrowski, J; Santos, SD; Suarez-Mutis, M; Machado, RL; Marinho, C; Nolder, D; Nosten, F; SUTHERLAND, C; CAMPINO, S; CLARK, T;
2024
Research Square
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Jody Phelan

Contact

United Kingdom