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Publications

Phylogenetic interpretation during outbreaks requires caution.
Villabona-Arenas, CJ; Hanage, WP; TULLY, DC;
2020
NATURE MICROBIOLOGY, (2020).5 7 10.1038/s41564-020-0738-5.
Modelling the effect of market forces on the impact of introducing human immunodeficiency virus pre-exposure prophylaxis among female sex workers.
QUAIFE, M; TERRIS-PRESTHOLT, F; Mukandavire, Z; Vickerman, P;
2020
HEALTH ECONOMICS, (2020).30 3 10.1002/hec.4211.
Estimation of Rift Valley fever virus spillover to humans during the Mayotte 2018-2019 epidemic.
Métras, R; EDMUNDS, WJ; Youssouffi, C; Dommergues, L; Fournié, G; CAMACHO, A; FUNK, S; Cardinale, E; Le Godais, G; Combo, S; Filleul, L; Youssouf, H; Subiros, M;
2020
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, (2020).117 39 10.1073/pnas.2004468117.
The impact of COVID-19 and strategies for mitigation and suppression in low- and middle-income countries.
Walker, PG T; Whittaker, C; Watson, OJ; BAGUELIN, M; Winskill, P; Hamlet, A; Djafaara, BA; Cucunubá, Z; Olivera Mesa, D; Green, W; Thompson, H; Nayagam, S; Ainslie, KE C; Bhatia, S; Bhatt, S; Boonyasiri, A; Boyd, O; Brazeau, NF; Cattarino, L; Cuomo-Dannenburg, G; Dighe, A; Donnelly, CA; Dorigatti, I; Van Elsland, SL; FitzJohn, R; ... Ghani, AC.
2020
Science, (2020).369 6502 10.1126/science.abc0035.
Definition of a genetic relatedness cutoff to exclude recent transmission of meticillin-resistant Staphylococcus aureus: a genomic epidemiology analysis.
COLL, F; Raven, KE; KNIGHT, GM; Blane, B; Harrison, EM; Leek, D; Enoch, DA; Brown, NM; Parkhill, J; Peacock, SJ;
2020
The Lancet. Microbe, (2020).1 8 10.1016/S2666-5247(20)30149-X.
Engagement and adherence trade-offs for SARS-CoV-2 contact tracing.
Lucas, T; Davis, E; Ayabina, D; Borlase, A; Crellen, T; Pi, L; MEDLEY, G; Yardley, L; KLEPAC, P; Gog, J; Hollingsworth, D;
2020
medRxiv (2020). 10.1101/2020.08.20.20178558.
Estimating the infection and case fatality ratio for COVID-19 using age-adjusted data from the outbreak on the Diamond Princess cruise ship.
RUSSELL, TW; Hellewell, J; JARVIS, CI; Van-Zandvoort, K; Abbott, S; RATNAYAKE, R; FLASCHE, S; EGGO, RM; KUCHARSKI, AJ;
2020
, Github (2020).
The Population Attributable Fraction (PAF) of cases due to gatherings and groups with relevance to COVID-19 mitigation strategies.
Brooks-Pollock, E; Read, JM; House, T; MEDLEY, GF; Keeling, MJ; Danon, L;
2020
medRxiv (2020). 10.1101/2020.03.20.20039537.
Prevalence and social determinants of psychological distress among people who use drugs in Cambodia.
Saing, CH; PREM, K; Uk, P; Chann, N; Chhoun, P; Mun, P; Tuot, S; Yi, S;
2020
INTERNATIONAL JOURNAL OF MENTAL HEALTH SYSTEMS, (2020).14 1 10.1186/s13033-020-00411-5.
Modelling the incremental benefit of introducing malaria screening strategies to antenatal care in Africa.
Walker, PG T; CAIRNS, M; Slater, H; Gutman, J; Kayentao, K; Williams, JE; Coulibaly, SO; Khairallah, C; Taylor, S; Meshnick, SR; Hill, J; Mwapasa, V; Kalilani-Phiri, L; BOJANG, K; Kariuki, S; Tagbor, H; Griffin, JT; Madanitsa, M; Ghani, AC H; Desai, M; Ter Kuile, FO;
2020
Nature Communications, (2020).11 1 10.1038/s41467-020-17528-3.