Publications

Prospective genomic surveillance of methicillin-resistant Staphylococcus aureus (MRSA) associated with bloodstream infection, England, 1 October 2012 to 30 September 2013.

Toleman, MS; Reuter, S; Jamrozy, D; Wilson, HJ; Blane, B; Harrison, EM; COLL, F; Hope, RJ; Kearns, A; Parkhill, J; PEACOCK, SJ; Török, ME;

2019

Eurosurveillance, (2019).24 4 10.2807/1560-7917.ES.2019.24.4.1800215.

Insights from the revised complete genome sequences of Acinetobacter baumannii strains AB307-0294 and ACICU belonging to global clones 1 and 2.

Hamidian, M; Wick, RR; Hartstein, RM; Judd, LM; HOLT, KE; Hall, RM;

2019

Microbial genomics, (2019).5 10 10.1099/mgen.0.000298.

Malaria nets shape up for resistance.

LINES, J;

2019

NATURE MICROBIOLOGY, (2019).5 1 10.1038/s41564-019-0646-8.

Machine Learning Predicts Accurately Mycobacterium tuberculosis Drug Resistance From Whole Genome Sequencing Data.

Deelder, W; Christakoudi, S; PHELAN, J; Benavente, ED; CAMPINO, S; McNerney, R; PALLA, L; CLARK, TG;

2019

Frontiers in Genetics, (2019).10 SEP 10.3389/fgene.2019.00922.

Markers of sulfadoxine-pyrimethamine resistance in Eastern Democratic Republic of Congo; implications for malaria chemoprevention.

Van Lenthe, M; Van der Meulen, R; Lassovski, M; Ouabo, A; Bakula, E; Badio, C; Cibenda, D; Okell, L; Piriou, E; GRIGNARD, L; Lanke, K; RAO, B; Bousema, T; ROPER, C;

2019

Malar J, (2019).18 1 10.1186/s12936-019-3057-7.

The recent emergence of a highly related virulent Clostridium difficile clade with unique characteristics.

SHAW, HA; PRESTON, MD; Vendrik, KE W; CAIRNS, MD; Browne, HP; STABLER, RA; Crobach, MJ T; Corver, J; Pituch, H; Ingebretsen, A; Pirmohamed, M; FAULDS-PAIN, A; VALIENTE, E; Lawley, TD; Fairweather, NF; Kuijper, EJ; WREN, BW;

2019

Clinical Microbiology and Infection, (2019).26 4 10.1016/j.cmi.2019.09.004.

Informal genomic surveillance of regional distribution of Salmonella Typhi genotypes and antimicrobial resistance via returning travellers.

Ingle, DJ; Nair, S; Hartman, H; Ashton, PM; DYSON, ZA; Day, M; Freedman, J; Chattaway, MA; HOLT, KE; Dallman, TJ;

2019

PLoS neglected tropical diseases, (2019).13 9 10.1371/journal.pntd.0007620.

Antimicrobial Resistance in the Asia Pacific region: a meeting report.

Yam, EL Y; Hsu, LY; Yap, EP-H; Yeo, TW; Lee, V; Schlundt, J; Lwin, MO; Limmathurotsakul, D; JIT, M; Dedon, P; Turner, P; WILDER-SMITH, A;

2019

Antimicrobial resistance and infection control, (2019).8 1 10.1186/s13756-019-0654-8.

Aetiology of invasive bacterial infection and antimicrobial resistance in neonates in sub-Saharan Africa: a systematic review and meta-analysis in line with the STROBE-NI reporting guidelines.

OKOMO, U; Akpalu, EN K; Le Doare, K; ROCA, A; COUSENS, S; Jarde, A; Sharland, M; KAMPMANN, B; LAWN, JE;

2019

The Lancet. Infectious diseases, (2019).19 11 10.1016/S1473-3099(19)30414-1.

One Health Genomic Surveillance of Escherichia coli Demonstrates Distinct Lineages and Mobile Genetic Elements in Isolates from Humans versus Livestock.

LUDDEN, C; Raven, KE; Jamrozy, D; Gouliouris, T; Blane, B; COLL, F; De Goffau, M; Naydenova, P; Horner, C; Hernandez-Garcia, J; Wood, P; Hadjirin, N; Radakovic, M; Brown, NM; Holmes, M; Parkhill, J; PEACOCK, SJ;

2019

mBio, (2019).10 1 10.1128/mBio.02693-18.